How to define an alternative MPI launcher
The pam script by default launches MPI runs with mpirun. If you cannot use mpirun because you are on a system which does not support it or which offers alternative MPI launchers (SGI, Cray), you can define your own DIRAC_MPI_COMMAND like this:
$ export DIRAC_MPI_COMMAND="mpirun -np 8"
$ export DIRAC_MPI_COMMAND="mpprun"
$ export DIRAC_MPI_COMMAND="aprun -n 24"
This will then launch:
$DIRAC_MPI_COMMAND dirac.x
instead of:
mpirun -np N dirac.x
Note that --mpi
overrides DIRAC_MPI_COMMAND.
Passing arguments to MPI launcher
You can pass arguments to the MPI launcher, for example:
./pam --scratchfull="/tmp/milias/TEST" --noarch --mpiarg="-x PATH -x LD_LIBRARY_PATH --wdir '/tmp/milias/TEST'" --mpi=4 --inp=cc.inp --mol=N2.ccpVDZ.mol
Note that you have provide proper workdir (the --wdir
flag) for your MPI launcher, otherwise it ends with error.
Concerning passing of environmental variables (through the -x
flag), if the variable is not defined,
the MPI launcher gives warning (like Warning: could not find environment variable "LD_LIBRARY_PATHx"
).